Naming scheme of the Processor Setting?

[yiyin]

For hemibrain, only the one with adult(hemibrain) works anything else does not seem to work.
This prohibits the use of two hemibrain settings each connecting to a different processor.

[TK-21st]

If you are referring to the 3D visualization settings and meshes then this is related to #20.

There needs to be a way for user to specify 3D visualization settings associated with each processor setting, which is currently hardcoded.

If either one of you (@yiyin @mkturkcan) have some kind of updated schema for processor setting implemented in NeuroArch (or some other sources) I can update the front-end accordingly

#20 (comment)

[yiyin]

No, I meant this file https://github.com/FlyBrainLab/NeuroMynerva/blob/master/schema/plugin.json.
The name has to be adult(hemibrain), adult(flycircuit), larva(l1em). If I have another hemibrain database that uses any name other than adult(hemibrain), the neuropils are not loaded properly.

[TK-21st]

It's the same issue. Currently when processor is set in neu3dwidget, the exact name of the processor is used to show meshes that are distributed with NeuroMynerva.

NeuroMynerva/src/widgets/neu3d-widget/widget.ts

Lines 800 to 867 in ff7cbb7

	switch (this._processor) {
	case 'larva(l1em)':
	this.neu3d._metadata.resetPosition =  {x: 42.057169835814626, y: 18.465885594337543, z: -509.65272951348953};
	this.neu3d._metadata.upVector = {x: 0.0022681554337180836, y: -0.9592325957384876, z: 0.2826087096034669};
	this.neu3d._metadata.cameraTarget = {x: 42.11358557008077, y: 74.90946190543991, z: 58.654427921234685};
	this.neu3d.updateControls();
	this.neu3d.addJson({ffbo_json: this._larvaMesh, showAfterLoadAll: true});
	window.active_neu3d_widget = this;
	this.neu3d.resetView();
	// this.sessionContext.session.kernel.requestExecute({code: super.initClientCode(', custom_config = "larva_config.ini"')});
	this.initClient().then((res) => {
	if (res) {
	this.setHasClient(true);
	(this._neu3dSearchbar.children[0].children[0] as HTMLInputElement).placeholder = "Write Query (Example: show OSNs)";
	} else {
	this.setHasClient(false);
	(this._neu3dSearchbar.children[0].children[0] as HTMLInputElement).placeholder = "Not connected to processor.";
	}
	})
	break;
	case 'adult(flycircuit)':
	this.neu3d._metadata.resetPosition = {x: 0, y: 0, z: 1800};
	this.neu3d._metadata.upVector = {x: 0., y: 1., z: 0.};
	this.neu3d.updateControls();
	this.neu3d.addJson({ffbo_json: this._adultMesh, showAfterLoadAll: true});
	window.active_neu3d_widget = this;
	this.neu3d.resetView();
	// this.sessionContext.session.kernel.requestExecute({code: super.initClientCode(', custom_config = "flycircuit_config.ini"')});
	this.initClient().then((res) => {
	if (res) {
	this.setHasClient(true);
	} else {
	this.setHasClient(false);
	(this._neu3dSearchbar.children[0].children[0] as HTMLInputElement).placeholder = "Not connected to processor.";
	}
	})
	break;
	case 'adult(hemibrain)':
	this.neu3d._metadata.resetPosition = {x: -0.41758013880199485, y: 151.63625728674563, z: -50.50723330508691};
	this.neu3d._metadata.upVector = {x: -0.0020307520395871814, y: -0.500303768173525, z: -0.8658475706482184};
	this.neu3d._metadata.cameraTarget = {x: 17.593074756823892, y: 22.60567192152306, z: 21.838699853616273};
	this.neu3d.updateControls();
	this.neu3d.addJson({ffbo_json: this._hemibrainMesh, showAfterLoadAll: true});
	window.active_neu3d_widget = this;
	this.neu3d.resetView();
	// this.sessionContext.session.kernel.requestExecute({code: super.initClientCode(', custom_config = "hemibrain_config.ini"')});
	this.initClient().then((res) => {
	if (res) {
	this.setHasClient(true);
	} else {
	this.setHasClient(false);
	}
	})
	break;
	default:
	(this._neu3dSearchbar.children[0].children[0] as HTMLInputElement).placeholder = 'Not connected to processor.';
	this.setHasClient(false);
	console.error(`[Neu3D-Widget] Processor ${newProcessor} not recognized.`);
	break;
	}
	// reset info panel
	this.info.reset();
	});
	});
	}

[TK-21st]

A temporary solution is added in 4575723.
The neu3d visualization setting is now part of the schema.

The user can do the following:

1. if one of the presets is specified, the default behavior for neu3d setting and meshes are included: (larva(l1em), adult(flycircuit), hemibrain(flycircuit)
2. otherwise, no meshes will be shown, and the camera setting is according to the user setting in the schema