update description with DOI and renvlock with plogr #68
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: document-and-deploy | ||
| on: | ||
| push: | ||
| pull_request: | ||
| release: | ||
| jobs: | ||
| document-and-deploy: | ||
| runs-on: ubuntu-latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| - uses: r-lib/actions/setup-pandoc@v2 | ||
| - name: Set up R version | ||
| uses: r-lib/actions/setup-r@v2 | ||
| with: | ||
| r-version: "oldrel" # As shinyapps.io needs some time to catch up after releases | ||
| use-public-rspm: true | ||
| - name: Set up R Dependencies | ||
| uses: r-lib/actions/setup-r-dependencies@v2 | ||
| with: | ||
| extra-packages: devtools, plogr, roxygen2, remotes, rsconnect, pkgdown | ||
| - name: Create documentation | ||
| run: | | ||
| R -e " | ||
| file.remove('NAMESPACE'); | ||
| descr <- readLines('DESCRIPTION'); | ||
| descr <- stringr::str_replace(descr, '^Date.*$', paste('Date:', Sys.Date())); | ||
| writeLines(descr, 'DESCRIPTION'); | ||
| roxygen2::roxygenise(); | ||
| try(devtools::build_manual()) | ||
| " | ||
| - name: commit | ||
| run: | | ||
| git config --local user.email "actions@github.com" | ||
| git config --local user.name "GitHub Actions" | ||
| git add -f man/\* NAMESPACE | ||
| git commit -m 'Documentation' || echo "No changes to commit" | ||
| git push origin || echo "No changes to commit" | ||
| - name: Deploy latest from dev | ||
| if: github.ref == 'refs/heads/dev' | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| RENV_CONFIG_SNAPSHOT_VALIDATE: "false" | ||
| run: | | ||
| R -e " | ||
| remotes::install_github('ESHackathon/CiteSource', force = TRUE); | ||
| rsconnect::setAccountInfo(name=${{secrets.SHINY_LUKAS_ACCOUNT}}, token=${{secrets.SHINY_LUKAS_TOKEN}}, secret=${{secrets.SHINY_LUKAS_SECRET}}); | ||
| rsconnect::deployApp( | ||
| appName = 'CiteSource_latest', | ||
| appDir = './inst/shiny-app/CiteSource', | ||
| forceUpdate = TRUE)" | ||
| - name: Deploy stable version from main | ||
| if: github.ref == 'refs/heads/main' | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| RENV_CONFIG_SNAPSHOT_VALIDATE: "false" | ||
| run: | | ||
| R -e " | ||
| remotes::install_github('ESHackathon/CiteSource', force = TRUE); | ||
| rsconnect::setAccountInfo(name=${{secrets.SHINY_LUKAS_ACCOUNT}}, token=${{secrets.SHINY_LUKAS_TOKEN}}, secret=${{secrets.SHINY_LUKAS_SECRET}}); | ||
| rsconnect::deployApp( | ||
| appName = 'CiteSource', | ||
| appDir = './inst/shiny-app/CiteSource', | ||
| forceUpdate = TRUE)" | ||
| - name: Create pkgdown | ||
| env: | ||
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | ||
| run: | | ||
| R -e " | ||
| if (!require(CiteSource)) remotes::install_github('ESHackathon/CiteSource', force = TRUE); | ||
| pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)" | ||
| - name: Deploy to GitHub pages 🚀 | ||
| if: ${{ github.ref_name }} == 'main' | ||
|
Check warning on line 85 in .github/workflows/document-and-deploy.yml
|
||
| uses: JamesIves/github-pages-deploy-action@v4 | ||
| with: | ||
| clean: true | ||
| branch: gh-pages | ||
| folder: docs | ||
