diff --git a/CITATION.cff b/CITATION.cff index 94745aa..5f07cd8 100644 --- a/CITATION.cff +++ b/CITATION.cff @@ -1,45 +1,83 @@ -cff-version: 1.2.0 -message: "If you use this work, please cite it using the following metadata." -title: "Pore2Chip: All-in-One Python Tool for Soil Microstructure Analysis and Micromodel Design" +cff-version: "1.2.0" authors: - - family-names: "Truong" - given-names: "Aramy" +- family-names: Truong + given-names: Aramy + orcid: "https://orcid.org/0009-0002-7467-7957" +- family-names: Mudunuru + given-names: Maruti K. + orcid: "https://orcid.org/0000-0002-2158-7723" +- family-names: Rooney + given-names: Erin C. + orcid: "https://orcid.org/0000-0002-9121-7699" +- family-names: Bhattacharjee + given-names: Arunima + orcid: "https://orcid.org/0000-0001-7482-8722" +- family-names: Varga + given-names: Tamas + orcid: "https://orcid.org/0000-0002-5492-866X" +- family-names: Mamud + given-names: Md Lal + orcid: "https://orcid.org/0000-0002-5764-1058" +- family-names: He + given-names: Xiaoliang + orcid: "https://orcid.org/0000-0003-3835-1917" +- family-names: Battu + given-names: Anil K. + orcid: "https://orcid.org/0000-0001-7724-5100" +- family-names: Karra + given-names: Satish + orcid: "https://orcid.org/0000-0001-7847-6293" +contact: +- family-names: Truong + given-names: Aramy + orcid: "https://orcid.org/0009-0002-7467-7957" +- family-names: Mudunuru + given-names: Maruti K. + orcid: "https://orcid.org/0000-0002-2158-7723" +doi: 10.5281/zenodo.16903861 +message: If you use this software, please cite our article in the + Journal of Open Source Software. +preferred-citation: + authors: + - family-names: Truong + given-names: Aramy orcid: "https://orcid.org/0009-0002-7467-7957" - affiliation: "EMSL" - - family-names: "Mudunuru" - given-names: "Maruti" + - family-names: Mudunuru + given-names: Maruti K. orcid: "https://orcid.org/0000-0002-2158-7723" - affiliation: "PNNL" - - family-names: "Rooney" - given-names: "Erin C." + - family-names: Rooney + given-names: Erin C. orcid: "https://orcid.org/0000-0002-9121-7699" - affiliation: "USDA-NRCS" - - family-names: "Bhattacharjee" - given-names: "Arunima" + - family-names: Bhattacharjee + given-names: Arunima orcid: "https://orcid.org/0000-0001-7482-8722" - affiliation: "EMSL" - - family-names: "Varga" - given-names: "Tamas" + - family-names: Varga + given-names: Tamas orcid: "https://orcid.org/0000-0002-5492-866X" - affiliation: "EMSL" - - family-names: "Mamud" - given-names: "Md Lal" + - family-names: Mamud + given-names: Md Lal orcid: "https://orcid.org/0000-0002-5764-1058" - affiliation: "PNNL" - - family-names: "He" - given-names: "Xiaoliang" + - family-names: He + given-names: Xiaoliang orcid: "https://orcid.org/0000-0003-3835-1917" - affiliation: "PNNL" - - family-names: "Battu" - given-names: "Anil K." + - family-names: Battu + given-names: Anil K. orcid: "https://orcid.org/0000-0001-7724-5100" - affiliation: "EMSL" - - family-names: "Karra" - given-names: "Satish" + - family-names: Karra + given-names: Satish orcid: "https://orcid.org/0000-0001-7847-6293" - affiliation: "EMSL" -version: "0.2.0" -date-released: "2024-7-15" -repository-code: "https://github.com/EMSL-Computing/Pore2Chip/" -license: "MIT" -doi: "XXXXX" \ No newline at end of file + date-published: 2025-08-29 + doi: 10.21105/joss.08052 + issn: 2475-9066 + issue: 112 + journal: Journal of Open Source Software + publisher: + name: Open Journals + start: 8052 + title: "Pore2Chip: All-in-one python tool for soil microstructure + analysis and micromodel design" + type: article + url: "https://joss.theoj.org/papers/10.21105/joss.08052" + volume: 10 +title: "Pore2Chip: All-in-one python tool for soil microstructure + analysis and micromodel design" diff --git a/README.md b/README.md index 4aa160b..e83b9d4 100644 --- a/README.md +++ b/README.md @@ -5,6 +5,8 @@ Pore2Chip is a Python module designed to streamline the process of analyzing X-r Documentation Quick Link: https://emsl-computing.github.io/Pore2Chip/ +[![DOI](https://joss.theoj.org/papers/10.21105/joss.08052/status.svg)](https://doi.org/10.21105/joss.08052) + ### A workflow for model-data-experiment (ModEx) design: Below is a conceptual figure, workflow, and vision for this all-in-one Python tool. The working principle starts with XCT imaging files, which will be characterized for soil structure-property relationships and then transformed into a 2D rendering applicable to pore-scale micromodel building. Micromodel experiments will then be used with PFLOTRAN/OpenFOAM/PINNs process models to simulate flow and reactive transport for calibration and V&V.