I attempted to replicate the csv fizzy implementation example, which included replicating the test documents. I received this error after the same command line call as shown in the example:
fizzy -n 2 -l Class -f MIM -m test.map -i test.csv -s -o test.ouput -r test.biom -v
usage: fizzy [-h] [-n SELECT] [-q BINS] -l LABEL [-f FS_METHOD] -i INPUT_FILE
[-m MAP_FILE] [-j] -o OUTPUT_FILE [-r OUTPUT_BIOM] [-v]
fizzy: error: unrecognized arguments: -s
When I took out the -s flag, I received this:
fizzy -n 2 -l Class -f MIM -m test.map -i test.csv -o test.ouput -r test.biom -v
Segmentation fault (core dumped)
I compiled all of the dependencies before trying this example, therefore I am not sure what is going wrong.
I attempted to replicate the csv fizzy implementation example, which included replicating the test documents. I received this error after the same command line call as shown in the example:
fizzy -n 2 -l Class -f MIM -m test.map -i test.csv -s -o test.ouput -r test.biom -v
usage: fizzy [-h] [-n SELECT] [-q BINS] -l LABEL [-f FS_METHOD] -i INPUT_FILE
[-m MAP_FILE] [-j] -o OUTPUT_FILE [-r OUTPUT_BIOM] [-v]
fizzy: error: unrecognized arguments: -s
When I took out the -s flag, I received this:
fizzy -n 2 -l Class -f MIM -m test.map -i test.csv -o test.ouput -r test.biom -v
Segmentation fault (core dumped)
I compiled all of the dependencies before trying this example, therefore I am not sure what is going wrong.