PyTissueOptics/pyproject.toml at main · DCC-Lab/PyTissueOptics · GitHub

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[build-system]
requires = ["setuptools>=77.0","setuptools_scm>=7"]
build-backend = "setuptools.build_meta"

[project.urls]
GitHub = "https://github.com/DCC-Lab/PyTissueOptics"

[project]
name = "pytissueoptics"
description = "Python module for 3D Monte Carlo Simulation of Light Propagation"
readme = "README.md"
authors = [
  { name = "Ludovick Begin", email = "ludovick.begin@gmail.com" },
  { name = "Marc-Andre Vigneault", email = "marc-andre.vigneault.2@ulaval.ca" },
  { name = "Daniel Cote", email = "dccote@cervo.ulaval.ca" }
]
license = "MIT"
license-files = ["LICENSE"]
requires-python = ">=3.9"
dynamic = ["version"]
dependencies = [
  "numpy>=2.0.0",
  "matplotlib",
  "tqdm",
  "psutil",
  "configobj",
  "Pygments",
  "siphash24; python_version < '3.13'",
  "pyopencl",
  "vtk>=9.4,<9.5",
  "mayavi-dev",
  "pyqt5",
]

[project.optional-dependencies]
dev = [
  "mockito",
  "pytest",
  "pytest-cov",
  "ruff",
]

[tool.setuptools]
packages = ["pytissueoptics"]

[tool.setuptools.package-data]
"pytissueoptics" = ["rayscattering/opencl/src/*.c", "**/*.obj", "examples/*.py"]

[tool.setuptools_scm]
version_scheme = "guess-next-dev"
local_scheme = "node-and-date"

[tool.pytest.ini_options]
testpaths = ["pytissueoptics"]
python_files = ["test*.py"]

[tool.ruff]
line-length = 120
target-version = "py39"

[tool.ruff.lint]
ignore = [
  "PT009",  # unittest-style asserts
  "F405",  # Name defined from star imports
]

[tool.ruff.format]
quote-style = "double"
indent-style = "space"

[tool.coverage.run]
source = ["pytissueoptics"]
omit = [
    "*/tests/*",
    "*/test*.py",
    "*/examples/*",
]

[tool.coverage.report]
show_missing = true