Update user guide and documentation for v1.1.0 #856
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| name: Tests and Codecov | |
| on: | |
| pull_request: | |
| branches: | |
| - master | |
| workflow_dispatch: | |
| jobs: | |
| BuildAndTest: | |
| runs-on: ubuntu-latest | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| # When re-running a PR job, GitHub Actions uses the merge commit created at | |
| # the time of the original run, not a fresh merge with the latest target branch. | |
| # This step ensures we always test against the most recent target branch. | |
| - name: Merge with latest target branch (pull_request only) | |
| if: github.event_name == 'pull_request' | |
| run: | | |
| git fetch origin ${{ github.event.pull_request.base.ref }} | |
| git merge --no-edit origin/${{ github.event.pull_request.base.ref }} | |
| - uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| # Specify python version your environment will have. Remember to quote this, or | |
| # YAML will think you want python 3.1 not 3.10 | |
| python-version: "3.11" | |
| # This uses *miniforge*, rather than *minicond*. The primary difference is that | |
| # the defaults channel is not enabled at all | |
| miniforge-version: latest | |
| # These properties enable the use of mamba, which is much faster and far less error | |
| # prone than conda while being completely compatible with the conda CLI | |
| use-mamba: true | |
| mamba-version: "*" | |
| - name: Install dependencies | |
| shell: bash -l {0} | |
| run: | | |
| mamba install _openmp_mutex=*=*_llvm cmake make boost git compilers numpy mkl mkl-include mkl-service pybind11 libblas=*=*mkl arpack beartype | |
| python -m pip install gcovr | |
| mamba install gtest | |
| mamba install pytest pytest-cov | |
| - name: CPU info | |
| shell: bash -l {0} | |
| run: lscpu | |
| - name: Configure CMake | |
| shell: bash -l {0} | |
| run: cmake -S ${{github.workspace}} -B ${{github.workspace}}/build -DCMAKE_INSTALL_PREFIX=/home/runner/work/Cytnx_lib -DUSE_MKL=on -DUSE_HPTT=on -DHPTT_ENABLE_FINE_TUNE=on -DHPTT_ENABLE_AVX=off -DBUILD_PYTHON=on -DCMAKE_EXPORT_COMPILE_COMMANDS=1 -DRUN_TESTS=on | |
| - name: Build | |
| shell: bash -l {0} | |
| working-directory: ${{github.workspace}}/build | |
| run: | | |
| cmake --version | |
| cmake --build . -j `nproc` | |
| - name: Run CTest | |
| shell: bash -l {0} | |
| working-directory: ${{github.workspace}}/build | |
| run: GTEST_COLOR=1 ctest --output-on-failure --output-junit junit.xml | |
| - name: Run gcovr | |
| shell: bash -l {0} | |
| working-directory: ${{github.workspace}}/build | |
| run: | | |
| gcovr -r .. . --xml gcovr.xml -e ".*_deps.*$" | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| token: ${{ secrets.CODECOV_TOKEN }} # not required for public repos | |
| #directory: ${{runner.workspace}}/build | |
| files: ${{github.workspace}}/build/gcovr.xml # optional | |
| #working-directory: ${{runner.workspace}}/build | |
| #root_dir: ${{runner.workspace}} | |
| fail_ci_if_error: true # optional (default = false) | |
| verbose: true # optional (default = false) | |
| #version: "v0.1.15" | |
| - name: Install for python tests | |
| shell: bash -l {0} | |
| working-directory: ${{github.workspace}}/build | |
| run: | | |
| make install | |
| - name: Set python path | |
| shell: bash -l {0} | |
| run: | | |
| echo "PYTHONPATH=/home/runner/work/Cytnx_lib" >> $GITHUB_ENV | |
| - name: Test with pytest | |
| shell: bash -l {0} | |
| run: | | |
| pytest pytests/ --doctest-modules --junitxml=junit/test-results.xml --cov=com --cov-report=xml --cov-report=html | |
| #- name: Upload gcovr files | |
| # uses: actions/upload-artifact@v3 | |
| # with: | |
| # name: CMakeError.log | |
| # path: /home/runner/work/Cytnx/Cytnx/build/CMakeFiles/CMakeError.log | |
| #- name: Upload junit files | |
| # uses: actions/upload-artifact@v3 | |
| # with: | |
| # name: junit_xml | |
| # path: ${{github.workspace}}/build/junit.xml |