Skip to content

Commit 3252fce

Browse files
realmarcinclaude
andcommitted
Add UMAP visualization of community taxonomic embedding space
- Symlink KG-Microbe embeddings (200D DeepWalk from taxa-media graph) - Generate 2D UMAP projection for 74 communities - Interactive scatterplot visualization at docs/community_umap.html Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
1 parent 7bff635 commit 3252fce

File tree

2 files changed

+274
-213
lines changed

2 files changed

+274
-213
lines changed
Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1 @@
1+
../../../../kg-microbe-projects/taxa_media/DeepWalkSkipGramEnsmallen_degreenorm_embedding_200_1_wouniprot__taxon_to_medium_2024-09-26_10_41_31.tsv.gz

0 commit comments

Comments
 (0)