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Single-cell transcriptomic profiling of human pancreatic islets reveals genes responsive to glucose exposure over 24 hours

Code used in Single-cell transcriptomic profiling of human pancreatic islets reveals genes responsive to glucose exposure over 24 hours.

Preprocessing and quality control procedures

  1. CellRanger v3.1.0
  2. Decontex workflow
  3. Quality control procedures and cell type labelling workflow

Analysis

  1. Time interpolation: scripts/time_interpolation.py
  2. Differential gene expression workflow
  3. PoPs analysis workflow