aws.yml

name: Deploy to Amazon ECR

on:
  push:
    branches:
      - main

env:
  AWS_REGION: us-east-1                   # set this to your preferred AWS region, e.g. us-west-1
  REGISTRY_ALIAS: chobiolab                # aws ecr public alias
  REPOSITORY: cellphonedb      # aws ecr repo path
  BUILD_PATH: cellphoneDB                 # dir location of build files in repo
  CPDB_VER: 3.1.0                         # version of coreSC

permissions:
  contents: read

jobs:
  deploy:
    name: Deploy
    runs-on: ubuntu-latest
    environment: production

    steps:
    - name: Checkout
      uses: actions/checkout@v3

    - name: Configure AWS credentials
      uses: aws-actions/configure-aws-credentials@v1
      with:
        aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
        aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
        aws-region: ${{ env.AWS_REGION }}

    - name: Login to Amazon ECR
      id: login-ecr
      uses: aws-actions/amazon-ecr-login@v1

    - name: Login to Amazon ECR Public
      id: login-ecr-public
      uses: aws-actions/amazon-ecr-login@v1
      with:
        registry-type: public

    # added this line to shorten the SHA tag
    - name: Add SHORT_SHA env property with commit short sha
      run: echo "SHORT_SHA=`echo ${{ github.sha }} | cut -c1-7`" >> $GITHUB_ENV

    - name: Build, tag, and push docker image to Amazon ECR Public
      env:
        REGISTRY: ${{ steps.login-ecr-public.outputs.registry }}
      run: |
        docker build -t $REGISTRY/$REGISTRY_ALIAS/$REPOSITORY:$CPDB_VER $BUILD_PATH
        docker push $REGISTRY/$REGISTRY_ALIAS/$REPOSITORY:$CPDB_VER