scdownstream/modules.json at dev · ChoBioLab/scdownstream · GitHub

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{
    "name": "nf-core/scdownstream",
    "homePage": "https://github.com/nf-core/scdownstream",
    "repos": {
        "https://github.com/nf-core/modules.git": {
            "modules": {
                "nf-core": {
                    "anndata/barcodes": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["h5ad_removebackground_barcodes_cellbender_anndata", "modules"]
                    },
                    "anndata/getsize": {
                        "branch": "master",
                        "git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
                        "installed_by": ["modules"]
                    },
                    "cellbender/merge": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["modules"]
                    },
                    "cellbender/removebackground": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["h5ad_removebackground_barcodes_cellbender_anndata", "modules"]
                    },
                    "doubletdetection": {
                        "branch": "master",
                        "git_sha": "b82d04bf00be51dacffeb5568380470fa85dbb46",
                        "installed_by": ["modules"]
                    },
                    "multiqc": {
                        "branch": "master",
                        "git_sha": "7b50cb7be890e4b28cffb82e438cc6a8d7805d3f",
                        "installed_by": ["modules"]
                    },
                    "scvitools/scar": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["modules"]
                    },
                    "scvitools/solo": {
                        "branch": "master",
                        "git_sha": "81880787133db07d9b4c1febd152c090eb8325dc",
                        "installed_by": ["modules"],
                        "patch": "modules/nf-core/scvitools/solo/scvitools-solo.diff"
                    },
                    "untar": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["modules"]
                    }
                }
            },
            "subworkflows": {
                "nf-core": {
                    "h5ad_removebackground_barcodes_cellbender_anndata": {
                        "branch": "master",
                        "git_sha": "23600f6cd1c7fc4da79709bb531e5ba3cd5e840e",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nextflow_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfcore_pipeline": {
                        "branch": "master",
                        "git_sha": "05954dab2ff481bcb999f24455da29a5828af08d",
                        "installed_by": ["subworkflows"]
                    },
                    "utils_nfschema_plugin": {
                        "branch": "master",
                        "git_sha": "2fd2cd6d0e7b273747f32e465fdc6bcc3ae0814e",
                        "installed_by": ["subworkflows"]
                    }
                }
            }
        }
    }
}