reformat ruff

sfluegel05 · sfluegel05 · commit d7c45fba65d1 · 2026-02-27T14:22:54.000+01:00
diff --git a/chebi_utils/obo_extractor.py b/chebi_utils/obo_extractor.py
@@ -117,7 +117,8 @@ def build_chebi_graph(filepath: str | Path) -> nx.DiGraph:
 
 
 def get_hierarchy_subgraph(chebi_graph: nx.DiGraph) -> nx.DiGraph:
-    """Subgraph of ChEBI including only edges corresponding to hierarchical relations (is_a). Also removes nodes that are not connected by any is_a edges to other nodes."""
+    """Subgraph of ChEBI including only edges corresponding to hierarchical relations (is_a).
+    Also removes nodes that are not connected by any is_a edges to other nodes."""
     return chebi_graph.edge_subgraph(
         (u, v) for u, v, d in chebi_graph.edges(data=True) if d.get("relation") == "is_a"
     )

Original file line number	Diff line number	Diff line change
`@@ -117,7 +117,8 @@ def build_chebi_graph(filepath: str \| Path) -> nx.DiGraph:`
`117`	`117`
`118`	`118`
`119`	`119`	`def get_hierarchy_subgraph(chebi_graph: nx.DiGraph) -> nx.DiGraph:`
`120`		`- """Subgraph of ChEBI including only edges corresponding to hierarchical relations (is_a). Also removes nodes that are not connected by any is_a edges to other nodes."""`
	`120`	`+ """Subgraph of ChEBI including only edges corresponding to hierarchical relations (is_a).`
	`121`	`+ Also removes nodes that are not connected by any is_a edges to other nodes."""`
`121`	`122`	`return chebi_graph.edge_subgraph(`
`122`	`123`	`(u, v) for u, v, d in chebi_graph.edges(data=True) if d.get("relation") == "is_a"`
`123`	`124`	`)`