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1 parent eebe687 commit 852606fCopy full SHA for 852606f
1 file changed
src/AMPlify.py
@@ -191,7 +191,7 @@ def main():
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seq_id.append(str(seq_record.id))
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peptide.append(str(seq_record.seq))
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- # look for indices for valid sequences
+ # look for indices of valid sequences
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valid_ix = []
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for i in range(len(peptide)):
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if len(peptide[i]) <= 200 and len(peptide[i]) >= 2 and set(peptide[i])-set(aa) == set():
@@ -264,7 +264,7 @@ def main():
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'Sequence': peptide,
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'Score': y_score,
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'Prediction': y_class,
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- 'Attention': [a for a in attention]})
+ 'Attention': attention})
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else:
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out = pd.DataFrame({'Sequence_ID':seq_id,
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