Bump version to 1.20.1 and update changelog for Snakemake compatibility fix

Author: melund

CHANGELOG.md

@@ -1,5 +1,12 @@
 # AnyPyTools Change Log
 
+## v1.20.1
+
+* Fixed an issue with AnyPyTools when running directly in the main thread 
+  of the `snakemake` workflow tool (i.e., directly in the snakefile). This fix forces
+  AnyPyTools to use the standard Python subprocess module when running in snakemake.
+
+
 ## v1.20.0
 
 * Fixed a problem that prevented multiple AnyPyTools instances from running

anypytools/__init__.py

@@ -36,7 +36,7 @@
     "NORMAL_PRIORITY_CLASS",
 ]
 
-__version__ = "1.20.0"
+__version__ = "1.20.1"
 
 
 def print_versions():

anypytools/abcutils.py

@@ -68,8 +68,7 @@
 ):
     from .jobpopen import JobPopen as Popen
 else:
-    print("running with normal subprocess.Popen")
-    logger.warning("running with normal subprocess.Popen")
+    logger.info("running with normal subprocess.Popen")
     from subprocess import Popen
 
 

pixi.lock

@@ -10,7 +10,7 @@ anypytools = {path= "."}
 
 [package]
 name = "anypytools"
-version="1.20.0"
+version="1.20.1"
 
 [package.build] 
 backend = { name = "pixi-build-python", version = "*" }