From 98e5b4b7bde6c62bb21f38b2b417a95df19c2d50 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:21:10 +0200
Subject: [PATCH 01/12] Play with GA build actions since package is not
 installing on Windows

---
 .github/workflows/build-wheels-windows.yml | 35 ++++++++++++++++++++++
 1 file changed, 35 insertions(+)
 create mode 100644 .github/workflows/build-wheels-windows.yml

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
new file mode 100644
index 0000000..2207bb8
--- /dev/null
+++ b/.github/workflows/build-wheels-windows.yml
@@ -0,0 +1,35 @@
+# This workflow builds Python wheels for Windows using cibuildwheel
+# See: https://cibuildwheel.readthedocs.io/en/stable/
+
+name: Build wheels (Windows)
+
+on:
+  workflow_dispatch:
+  push:
+    branches: [ main, master ]
+  pull_request:
+    branches: [ main, master ]
+
+jobs:
+  build_wheels:
+    runs-on: windows-latest
+    strategy:
+      matrix:
+        python-version: [ "3.8", "3.9", "3.10", "3.11" ]
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python ${{ matrix.python-version }}
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ matrix.python-version }}
+    - name: Install cibuildwheel
+      run: pip install cibuildwheel
+    - name: Build wheels
+      run: cibuildwheel --platform windows
+      env:
+        CIBW_BUILD: cp3*-win_amd64
+    - name: Upload wheels
+      uses: actions/upload-artifact@v4
+      with:
+        name: wheels
+        path: wheelhouse/*.whl

From 1f2b209034f05ddf8303f27d6f336f8ef8994a5e Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:22:04 +0200
Subject: [PATCH 02/12] Add branch to trigger build

---
 .github/workflows/build-wheels-windows.yml | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 2207bb8..9b482c7 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -6,9 +6,9 @@ name: Build wheels (Windows)
 on:
   workflow_dispatch:
   push:
-    branches: [ main, master ]
+    branches: [ main, master, test_ga_build ]
   pull_request:
-    branches: [ main, master ]
+    branches: [ main, master, test_ga_build ]
 
 jobs:
   build_wheels:

From c88a273c7e12bb66bdb2411d12a7690509ab4d8b Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:30:02 +0200
Subject: [PATCH 03/12] Fix python version being built

---
 .github/workflows/build-wheels-windows.yml | 14 ++++++++------
 1 file changed, 8 insertions(+), 6 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 9b482c7..2d9c739 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -15,19 +15,21 @@ jobs:
     runs-on: windows-latest
     strategy:
       matrix:
-        python-version: [ "3.8", "3.9", "3.10", "3.11" ]
+        python-version: [ "3.9", "3.10", "3.11", "3.12" ]
     steps:
     - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
       uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
-    - name: Install cibuildwheel
-      run: pip install cibuildwheel
-    - name: Build wheels
-      run: cibuildwheel --platform windows
+    - name: Install build dependencies
+      run: pip install build
+    - name: Build wheels with cibuildwheel
+      uses: pypa/cibuildwheel@v2.23.3
+      with:
+        output-dir: wheelhouse
       env:
-        CIBW_BUILD: cp3*-win_amd64
+        CIBW_PLATFORM: windows
     - name: Upload wheels
       uses: actions/upload-artifact@v4
       with:

From 5d5ed3ccc4fa2033080ec5e0c8a43f47da98cbbf Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:35:17 +0200
Subject: [PATCH 04/12] WIP issue with python version

---
 .github/workflows/build-wheels-windows.yml | 11 +++--------
 1 file changed, 3 insertions(+), 8 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 2d9c739..987f044 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -13,23 +13,18 @@ on:
 jobs:
   build_wheels:
     runs-on: windows-latest
-    strategy:
-      matrix:
-        python-version: [ "3.9", "3.10", "3.11", "3.12" ]
     steps:
     - uses: actions/checkout@v4
-    - name: Set up Python ${{ matrix.python-version }}
+    - name: Set up Python
       uses: actions/setup-python@v5
       with:
-        python-version: ${{ matrix.python-version }}
-    - name: Install build dependencies
-      run: pip install build
+        python-version: '3.11'
     - name: Build wheels with cibuildwheel
       uses: pypa/cibuildwheel@v2.23.3
       with:
         output-dir: wheelhouse
       env:
-        CIBW_PLATFORM: windows
+        CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
     - name: Upload wheels
       uses: actions/upload-artifact@v4
       with:

From 3aaf99fffb3820f670cd45714e70b720d91141ab Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:43:27 +0200
Subject: [PATCH 05/12] Upload the resulting wheel individually

---
 .github/workflows/build-wheels-windows.yml | 23 +++++++++++++++++++---
 1 file changed, 20 insertions(+), 3 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 987f044..47a8b4b 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -25,8 +25,25 @@ jobs:
         output-dir: wheelhouse
       env:
         CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
-    - name: Upload wheels
+    - name: Upload wheels for each Python version
+      run: |
+        for whl in wheelhouse/*.whl
+        set whl_name (basename $whl)
+        echo "Uploading $whl_name"
+        gh release upload temp-release $whl --clobber || true
+        echo "::group::Upload $whl_name"
+        echo "::endgroup::"
+      shell: bash
+    - name: Upload wheels as separate artifacts
+      run: |
+        for whl in wheelhouse/*.whl; do
+          whl_name=$(basename "$whl" .whl)
+          echo "Uploading $whl as $whl_name"
+          mkdir -p artifacts/$whl_name
+          cp "$whl" artifacts/$whl_name/
+        done
+      shell: bash
+    - name: Upload all wheel artifacts
       uses: actions/upload-artifact@v4
       with:
-        name: wheels
-        path: wheelhouse/*.whl
+        path: artifacts/*/*.whl

From 1b02339b48ac32d10781ee57ed20a755be490940 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:46:23 +0200
Subject: [PATCH 06/12] Automatically make a release when push to main/master

Will also upload the wheel to the new release.
---
 .github/workflows/build-wheels-windows.yml | 47 ++++++++++++----------
 1 file changed, 25 insertions(+), 22 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 47a8b4b..9c5a6ab 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -6,9 +6,9 @@ name: Build wheels (Windows)
 on:
   workflow_dispatch:
   push:
-    branches: [ main, master, test_ga_build ]
+    branches: [ main, master ]
   pull_request:
-    branches: [ main, master, test_ga_build ]
+    branches: [ main, master ]
 
 jobs:
   build_wheels:
@@ -25,25 +25,28 @@ jobs:
         output-dir: wheelhouse
       env:
         CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
-    - name: Upload wheels for each Python version
+    - name: Get version from git tag
+      id: get_version
       run: |
-        for whl in wheelhouse/*.whl
-        set whl_name (basename $whl)
-        echo "Uploading $whl_name"
-        gh release upload temp-release $whl --clobber || true
-        echo "::group::Upload $whl_name"
-        echo "::endgroup::"
-      shell: bash
-    - name: Upload wheels as separate artifacts
-      run: |
-        for whl in wheelhouse/*.whl; do
-          whl_name=$(basename "$whl" .whl)
-          echo "Uploading $whl as $whl_name"
-          mkdir -p artifacts/$whl_name
-          cp "$whl" artifacts/$whl_name/
-        done
-      shell: bash
-    - name: Upload all wheel artifacts
-      uses: actions/upload-artifact@v4
+        if [ "$GITHUB_REF_TYPE" = "tag" ]; then
+          VERSION=${GITHUB_REF#refs/tags/}
+        else
+          VERSION=$(git describe --tags --abbrev=0)
+        fi
+        echo "version=$VERSION" >> $GITHUB_OUTPUT
+    - name: Create GitHub Release
+      if: github.ref_type == 'tag' || github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master'
+      uses: softprops/action-gh-release@v2
+      with:
+        tag_name: ${{ steps.get_version.outputs.version }}
+        name: Release ${{ steps.get_version.outputs.version }}
+        draft: false
+        prerelease: false
+      env:
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+    - name: Upload wheels to GitHub Release
+      uses: softprops/action-gh-release@v2
       with:
-        path: artifacts/*/*.whl
+        files: wheelhouse/*.whl
+      env:
+        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

From 5571dbf0dd663a1a8b25e40ecc98dc4d06926259 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 11:56:42 +0200
Subject: [PATCH 07/12] Fix the call to use bash

---
 .github/workflows/build-wheels-windows.yml | 1 +
 1 file changed, 1 insertion(+)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 9c5a6ab..f5b24be 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -27,6 +27,7 @@ jobs:
         CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
     - name: Get version from git tag
       id: get_version
+      shell: bash
       run: |
         if [ "$GITHUB_REF_TYPE" = "tag" ]; then
           VERSION=${GITHUB_REF#refs/tags/}

From c10493970fb7ec86997c4fab7463c56733fb1485 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 13:10:56 +0200
Subject: [PATCH 08/12] Mark the release as pre-release if there are no tags.

Also uses commit-sha as release version for pre-release or tag number
---
 .github/workflows/build-wheels-windows.yml | 8 ++++----
 1 file changed, 4 insertions(+), 4 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index f5b24be..eaa6908 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -32,17 +32,17 @@ jobs:
         if [ "$GITHUB_REF_TYPE" = "tag" ]; then
           VERSION=${GITHUB_REF#refs/tags/}
         else
-          VERSION=$(git describe --tags --abbrev=0)
+          VERSION=$(git describe --tags --abbrev=0 2>/dev/null || echo "latest-$(git rev-parse --short HEAD)")
         fi
         echo "version=$VERSION" >> $GITHUB_OUTPUT
     - name: Create GitHub Release
       if: github.ref_type == 'tag' || github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master'
       uses: softprops/action-gh-release@v2
       with:
-        tag_name: ${{ steps.get_version.outputs.version }}
-        name: Release ${{ steps.get_version.outputs.version }}
+        tag_name: ${{ github.ref_type == 'tag' && github.ref_name || steps.get_version.outputs.version }}
+        name: Release ${{ github.ref_type == 'tag' && github.ref_name || steps.get_version.outputs.version }}
         draft: false
-        prerelease: false
+        prerelease: ${{ github.ref_type != 'tag' }}
       env:
         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     - name: Upload wheels to GitHub Release

From 5005674082e61b49f7f89032483d2c5c807d2229 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 13:22:39 +0200
Subject: [PATCH 09/12] Change approach to get triggered only on release

Wheels will be uploaded to the release
---
 .github/workflows/build-wheels-windows.yml | 25 ++++------------------
 1 file changed, 4 insertions(+), 21 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index eaa6908..4f3c31d 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -4,11 +4,8 @@
 name: Build wheels (Windows)
 
 on:
-  workflow_dispatch:
-  push:
-    branches: [ main, master ]
-  pull_request:
-    branches: [ main, master ]
+  release:
+    types: [ published ]
 
 jobs:
   build_wheels:
@@ -25,24 +22,10 @@ jobs:
         output-dir: wheelhouse
       env:
         CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
-    - name: Get version from git tag
-      id: get_version
-      shell: bash
-      run: |
-        if [ "$GITHUB_REF_TYPE" = "tag" ]; then
-          VERSION=${GITHUB_REF#refs/tags/}
-        else
-          VERSION=$(git describe --tags --abbrev=0 2>/dev/null || echo "latest-$(git rev-parse --short HEAD)")
-        fi
-        echo "version=$VERSION" >> $GITHUB_OUTPUT
-    - name: Create GitHub Release
-      if: github.ref_type == 'tag' || github.ref == 'refs/heads/main' || github.ref == 'refs/heads/master'
+    - name: Upload wheels to GitHub Release
       uses: softprops/action-gh-release@v2
       with:
-        tag_name: ${{ github.ref_type == 'tag' && github.ref_name || steps.get_version.outputs.version }}
-        name: Release ${{ github.ref_type == 'tag' && github.ref_name || steps.get_version.outputs.version }}
-        draft: false
-        prerelease: ${{ github.ref_type != 'tag' }}
+        files: wheelhouse/*.whl
       env:
         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
     - name: Upload wheels to GitHub Release

From 2a9fc968dd611a02edc26fbf5946c96a053b74c0 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 14:02:53 +0200
Subject: [PATCH 10/12] Make it available for all python version above 3

---
 .github/workflows/build-wheels-windows.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 4f3c31d..5a78b3c 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -21,7 +21,7 @@ jobs:
       with:
         output-dir: wheelhouse
       env:
-        CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
+        CIBW_BUILD: cp3*-win_amd64
     - name: Upload wheels to GitHub Release
       uses: softprops/action-gh-release@v2
       with:

From b991a30303bc436e2d73ed208d3ecc6cc23c3da3 Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 14:11:27 +0200
Subject: [PATCH 11/12] Remove duplicate command

---
 .github/workflows/build-wheels-windows.yml | 6 ------
 1 file changed, 6 deletions(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 5a78b3c..587c609 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -28,9 +28,3 @@ jobs:
         files: wheelhouse/*.whl
       env:
         GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
-    - name: Upload wheels to GitHub Release
-      uses: softprops/action-gh-release@v2
-      with:
-        files: wheelhouse/*.whl
-      env:
-        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

From 1da87e7e2356c2b72e5e2a393b88a001c96be1aa Mon Sep 17 00:00:00 2001
From: Laurent Guerard <laurent.guerard@unibas.ch>
Date: Thu, 3 Jul 2025 14:15:27 +0200
Subject: [PATCH 12/12] Fix versions of python

3.13 is failing with Cpython changes, and therefore can't be built so
fixing it to 3.9, 3.10, 3.11, 3.12
---
 .github/workflows/build-wheels-windows.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/build-wheels-windows.yml b/.github/workflows/build-wheels-windows.yml
index 587c609..e6265a7 100644
--- a/.github/workflows/build-wheels-windows.yml
+++ b/.github/workflows/build-wheels-windows.yml
@@ -21,7 +21,7 @@ jobs:
       with:
         output-dir: wheelhouse
       env:
-        CIBW_BUILD: cp3*-win_amd64
+        CIBW_BUILD: cp39-win_amd64 cp310-win_amd64 cp311-win_amd64 cp312-win_amd64
     - name: Upload wheels to GitHub Release
       uses: softprops/action-gh-release@v2
       with: